http://glutamate.med.kyoto-u.ac.jp/e/index.php?action=history&feed=atom&title=Bota_et_al_code 2026-05-08T11:20:29Z Revision history for this page on the wiki MediaWiki 1.45.3 http://glutamate.med.kyoto-u.ac.jp/e/index.php?title=Bota_et_al_code&diff=8592&oldid=prev 2026-05-07T09:44:10Z

<p></p> <table style="background-color: #fff; color: #202122;" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 09:44, 7 May 2026</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l15">Line 15:</td> <td colspan="2" class="diff-lineno">Line 15:</td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*SynchronousFiringACCHPCpermouseShuffling [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPCpermouseShuffling.m]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*SynchronousFiringACCHPCpermouseShuffling [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPCpermouseShuffling.m]</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*ThreeContextDecoderSCcells [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ThreeContextDecoderSCcells.m]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*ThreeContextDecoderSCcells [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ThreeContextDecoderSCcells.m]</div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*Cell detection [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/cell_roi_detection.m]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*Ca event detection [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/event_detection_intensity.m]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*Cell tracking across days [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/multiday_cell_tracking.m]</ins></div></td></tr> </table>

Ayaka Bota http://glutamate.med.kyoto-u.ac.jp/e/index.php?title=Bota_et_al_code&diff=8591&oldid=prev 2026-05-06T08:59:05Z

<p></p> <table style="background-color: #fff; color: #202122;" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 08:59, 6 May 2026</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==MatLab Script==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==MatLab Script==</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*ACC_create_singlelap_ratemaps <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ACC_create_singlelap_ratemaps.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*ACC_create_singlelap_ratemaps [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ACC_create_singlelap_ratemaps.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*ACCandHPCTSNE <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ACCandHPCTSNE.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*ACCandHPCTSNE [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ACCandHPCTSNE.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*ACCTSNE <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ACCTSNE.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*ACCTSNE [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ACCTSNE.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*AnimalHeadingCode <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/AnimalHeadingCode.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*AnimalHeadingCode [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/AnimalHeadingCode.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*ca_imag_to_ratemap_v3_directional <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ca_imag_to_ratemap_v3_directional.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*ca_imag_to_ratemap_v3_directional [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ca_imag_to_ratemap_v3_directional.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*ContextDecodingSCcells <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ContextDecodingSCcells.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*ContextDecodingSCcells [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ContextDecodingSCcells.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*create_cell_labels_new_version_basic_hpcacc <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/create_cell_labels_new_version_basic_hpcacc.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*create_cell_labels_new_version_basic_hpcacc [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/create_cell_labels_new_version_basic_hpcacc.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*FractionofEnvironmentSCPCHPC <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/FractionofEnvironmentSCPCHPC.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*FractionofEnvironmentSCPCHPC [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/FractionofEnvironmentSCPCHPC.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*OFmapswithzerooccupancy <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/OFmapswithzerooccupancy.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*OFmapswithzerooccupancy [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/OFmapswithzerooccupancy.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*PositionDecoder <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/PositionDecoder.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*PositionDecoder [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/PositionDecoder.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*SCCellMaps <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SCCellMaps.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*SCCellMaps [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SCCellMaps.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*SynchronousFiringACCHPC <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPC.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*SynchronousFiringACCHPC [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPC.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*SynchronousFiringACCHPCpermouse <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPCpermouse.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*SynchronousFiringACCHPCpermouse [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPCpermouse.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*SynchronousFiringACCHPCpermouseShuffling <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPCpermouseShuffling.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*SynchronousFiringACCHPCpermouseShuffling [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPCpermouseShuffling.m]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*ThreeContextDecoderSCcells <del style="font-weight: bold; text-decoration: none;">[</del>[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ThreeContextDecoderSCcells.m<del style="font-weight: bold; text-decoration: none;">]</del>]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*ThreeContextDecoderSCcells [http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ThreeContextDecoderSCcells.m]</div></td></tr> </table>

Yasunorihayashi http://glutamate.med.kyoto-u.ac.jp/e/index.php?title=Bota_et_al_code&diff=8590&oldid=prev 2026-05-06T08:22:00Z

<p></p> <table style="background-color: #fff; color: #202122;" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 08:22, 6 May 2026</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l5">Line 5:</td> <td colspan="2" class="diff-lineno">Line 5:</td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*AnimalHeadingCode [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/AnimalHeadingCode.m]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*AnimalHeadingCode [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/AnimalHeadingCode.m]]</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*ca_imag_to_ratemap_v3_directional [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ca_imag_to_ratemap_v3_directional.m]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*ca_imag_to_ratemap_v3_directional [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ca_imag_to_ratemap_v3_directional.m]]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*<del style="font-weight: bold; text-decoration: none;">ContextDecodingSCells </del>[[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/<del style="font-weight: bold; text-decoration: none;">ContextDecodingSCells</del>.m]]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*<ins style="font-weight: bold; text-decoration: none;">ContextDecodingSCcells </ins>[[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/<ins style="font-weight: bold; text-decoration: none;">ContextDecodingSCcells</ins>.m]]</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*create_cell_labels_new_version_basic_hpcacc [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/create_cell_labels_new_version_basic_hpcacc.m]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*create_cell_labels_new_version_basic_hpcacc [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/create_cell_labels_new_version_basic_hpcacc.m]]</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*FractionofEnvironmentSCPCHPC [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/FractionofEnvironmentSCPCHPC.m]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*FractionofEnvironmentSCPCHPC [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/FractionofEnvironmentSCPCHPC.m]]</div></td></tr> <tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l14">Line 14:</td> <td colspan="2" class="diff-lineno">Line 14:</td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*SynchronousFiringACCHPCpermouse [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPCpermouse.m]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*SynchronousFiringACCHPCpermouse [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPCpermouse.m]]</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*SynchronousFiringACCHPCpermouseShuffling [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPCpermouseShuffling.m]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*SynchronousFiringACCHPCpermouseShuffling [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPCpermouseShuffling.m]]</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*<del style="font-weight: bold; text-decoration: none;">ThreeContextDecoderSCells </del>[[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/<del style="font-weight: bold; text-decoration: none;">ThreeContextDecoderSCells</del>.m]]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*<ins style="font-weight: bold; text-decoration: none;">ThreeContextDecoderSCcells </ins>[[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/<ins style="font-weight: bold; text-decoration: none;">ThreeContextDecoderSCcells</ins>.m]]</div></td></tr> </table>

Yasunorihayashi http://glutamate.med.kyoto-u.ac.jp/e/index.php?title=Bota_et_al_code&diff=8589&oldid=prev 2026-05-06T08:16:10Z

<p></p> <table style="background-color: #fff; color: #202122;" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 08:16, 6 May 2026</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==MatLab Script==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==MatLab Script==</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*<del style="font-weight: bold; text-decoration: none;">Test </del>[[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/<del style="font-weight: bold; text-decoration: none;">test</del>.<del style="font-weight: bold; text-decoration: none;">txt</del>]]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*<ins style="font-weight: bold; text-decoration: none;">ACC_create_singlelap_ratemaps </ins>[[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/<ins style="font-weight: bold; text-decoration: none;">ACC_create_singlelap_ratemaps</ins>.<ins style="font-weight: bold; text-decoration: none;">m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*ACCandHPCTSNE [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ACCandHPCTSNE.m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*ACCTSNE [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ACCTSNE.m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*AnimalHeadingCode [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/AnimalHeadingCode.m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*ca_imag_to_ratemap_v3_directional [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ca_imag_to_ratemap_v3_directional.m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*ContextDecodingSCells [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ContextDecodingSCells.m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*create_cell_labels_new_version_basic_hpcacc [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/create_cell_labels_new_version_basic_hpcacc.m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*FractionofEnvironmentSCPCHPC [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/FractionofEnvironmentSCPCHPC.m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*OFmapswithzerooccupancy [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/OFmapswithzerooccupancy.m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*PositionDecoder [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/PositionDecoder.m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*SCCellMaps [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SCCellMaps.m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*SynchronousFiringACCHPC [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPC.m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*SynchronousFiringACCHPCpermouse [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPCpermouse.m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*SynchronousFiringACCHPCpermouseShuffling [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/SynchronousFiringACCHPCpermouseShuffling.m]]</ins></div></td></tr> <tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*ThreeContextDecoderSCells [[http://glutamate.med.kyoto-u.ac.jp/e/Bota_et_al_code/ThreeContextDecoderSCells.m</ins>]]</div></td></tr> </table>

Yasunorihayashi http://glutamate.med.kyoto-u.ac.jp/e/index.php?title=Bota_et_al_code&diff=8588&oldid=prev 2026-05-05T14:30:37Z

<p></p> <table style="background-color: #fff; color: #202122;" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 14:30, 5 May 2026</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==MatLab Script==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==MatLab Script==</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*Test [[http://glutamate.med.kyoto-u.ac.jp/Bota_et_al_code/test.txt]]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*Test [[http://glutamate.med.kyoto-u.ac.jp<ins style="font-weight: bold; text-decoration: none;">/e</ins>/Bota_et_al_code/test.txt]]</div></td></tr> </table>

Yasunorihayashi http://glutamate.med.kyoto-u.ac.jp/e/index.php?title=Bota_et_al_code&diff=8587&oldid=prev 2026-05-05T13:36:42Z

<p></p> <table style="background-color: #fff; color: #202122;" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 13:36, 5 May 2026</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1">Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==MatLab Script==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==MatLab Script==</div></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*Test [[http://glutamate.med.kyoto-u.ac.jp/Bota_et_al_code/<del style="font-weight: bold; text-decoration: none;">text</del>.txt]]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*Test [[http://glutamate.med.kyoto-u.ac.jp/Bota_et_al_code/<ins style="font-weight: bold; text-decoration: none;">test</ins>.txt]]</div></td></tr> </table>

Yasunorihayashi http://glutamate.med.kyoto-u.ac.jp/e/index.php?title=Bota_et_al_code&diff=8586&oldid=prev 2026-05-05T13:35:57Z

<p>Created page with &quot;==MatLab Script== *Test <a href="/e/index.php?title=Http://glutamate.med.kyoto-u.ac.jp/Bota_et_al_code/text.txt&amp;action=edit&amp;redlink=1" class="new" title="Http://glutamate.med.kyoto-u.ac.jp/Bota et al code/text.txt (page does not exist)">http://glutamate.med.kyoto-u.ac.jp/Bota_et_al_code/text.txt</a>&quot;</p> <p><b>New page</b></p><div>==MatLab Script==<br /> *Test [[http://glutamate.med.kyoto-u.ac.jp/Bota_et_al_code/text.txt]]</div>

Yasunorihayashi